From aec7ddb56e5f0eb94c5207d683e81e8e3a370cbe Mon Sep 17 00:00:00 2001
From: Claude <noreply@anthropic.com>
Date: Wed, 11 Nov 2026 16:56:32 +0000
Subject: [PATCH] chore(lfs): trim 3,939 files whose LFS objects never reached
 the server

Their pointers were committed in a5ed8c3d (2026-08-01) and the objects were
never uploaded: the server answers 404 for all of them, and no copy exists
(Captain Bob, 2026-11-11: "they can be trimmed out").

Removed: 3,827 phase-1 logs (docs/working/archive/legacy/phase-1), 3 in
docs/working/archive/historical, 106 DoE CSVs in experiments/bare_metal/runs,
QEMU_BASELINE.log, docs/SYSTEM_NARRATIVE.log, docs/ontology.log.

Kept: the 5 LaTeX build logs under docs/patent (legal hold) -- excluded from
fetch instead. .lfsconfig excludes every one of these paths, so older commits
check out and LFS fetches run without 404s.

Every LFS pointer left in the tree (1,195) has its object on the server.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_017RzZgrf7V7Zk2iczBXDRbm
---
 .lfsconfig                                                  | 6 ++++++
 QEMU_BASELINE.log                                           | 3 ---
 docs/SYSTEM_NARRATIVE.log                                   | 3 ---
 docs/ontology.log                                           | 3 ---
 .../historical/2026-07-birthing/acceptance-logs/amd64.log   | 3 ---
 .../historical/2026-07-birthing/acceptance-logs/arm64.log   | 3 ---
 .../historical/2026-07-birthing/acceptance-logs/riscv64.log | 3 ---
 docs/working/archive/legacy/phase-1/Reference/build.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_1.log | 3 ---
 .../run_logs/A_BASELINE_run_10.log                          | 3 ---
 .../run_logs/A_BASELINE_run_11.log                          | 3 ---
 .../run_logs/A_BASELINE_run_12.log                          | 3 ---
 .../run_logs/A_BASELINE_run_13.log                          | 3 ---
 .../run_logs/A_BASELINE_run_14.log                          | 3 ---
 .../run_logs/A_BASELINE_run_15.log                          | 3 ---
 .../run_logs/A_BASELINE_run_16.log                          | 3 ---
 .../run_logs/A_BASELINE_run_17.log                          | 3 ---
 .../run_logs/A_BASELINE_run_18.log                          | 3 ---
 .../run_logs/A_BASELINE_run_19.log                          | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_2.log | 3 ---
 .../run_logs/A_BASELINE_run_20.log                          | 3 ---
 .../run_logs/A_BASELINE_run_21.log                          | 3 ---
 .../run_logs/A_BASELINE_run_22.log                          | 3 ---
 .../run_logs/A_BASELINE_run_23.log                          | 3 ---
 .../run_logs/A_BASELINE_run_24.log                          | 3 ---
 .../run_logs/A_BASELINE_run_25.log                          | 3 ---
 .../run_logs/A_BASELINE_run_26.log                          | 3 ---
 .../run_logs/A_BASELINE_run_27.log                          | 3 ---
 .../run_logs/A_BASELINE_run_28.log                          | 3 ---
 .../run_logs/A_BASELINE_run_29.log                          | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_3.log | 3 ---
 .../run_logs/A_BASELINE_run_30.log                          | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_4.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_5.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_6.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_7.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_8.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_9.log | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_1.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_10.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_11.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_12.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_13.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_14.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_15.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_16.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_17.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_18.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_19.log   | 3 ---
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 .../full_90_run_comprehensive/run_logs/B_CACHE_run_22.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_23.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_24.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_25.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_26.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_27.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_28.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_29.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_3.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_30.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_4.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_5.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_6.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_7.log    | 3 ---
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 .../full_90_run_comprehensive/run_logs/B_CACHE_run_9.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_1.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_10.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_11.log    | 3 ---
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 .../full_90_run_comprehensive/run_logs/C_FULL_run_19.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_2.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_20.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_21.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_22.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_23.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_24.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_25.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_26.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_27.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_28.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_29.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_3.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_30.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_4.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_5.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_6.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_7.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_8.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_9.log     | 3 ---
 .../full_90_run_comprehensive/run_logs/build_A_BASELINE.log | 3 ---
 .../full_90_run_comprehensive/run_logs/build_B_CACHE.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/build_C_FULL.log     | 3 ---
 .../Reference/physics_experiment/experiment_execution.log   | 3 ---
 .../physics_experiment/experiment_execution_v2.log          | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_1.log | 3 ---
 .../run_logs/A_BASELINE_run_10.log                          | 3 ---
 .../run_logs/A_BASELINE_run_11.log                          | 3 ---
 .../run_logs/A_BASELINE_run_12.log                          | 3 ---
 .../run_logs/A_BASELINE_run_13.log                          | 3 ---
 .../run_logs/A_BASELINE_run_14.log                          | 3 ---
 .../run_logs/A_BASELINE_run_15.log                          | 3 ---
 .../run_logs/A_BASELINE_run_16.log                          | 3 ---
 .../run_logs/A_BASELINE_run_17.log                          | 3 ---
 .../run_logs/A_BASELINE_run_18.log                          | 3 ---
 .../run_logs/A_BASELINE_run_19.log                          | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_2.log | 3 ---
 .../run_logs/A_BASELINE_run_20.log                          | 3 ---
 .../run_logs/A_BASELINE_run_21.log                          | 3 ---
 .../run_logs/A_BASELINE_run_22.log                          | 3 ---
 .../run_logs/A_BASELINE_run_23.log                          | 3 ---
 .../run_logs/A_BASELINE_run_24.log                          | 3 ---
 .../run_logs/A_BASELINE_run_25.log                          | 3 ---
 .../run_logs/A_BASELINE_run_26.log                          | 3 ---
 .../run_logs/A_BASELINE_run_27.log                          | 3 ---
 .../run_logs/A_BASELINE_run_28.log                          | 3 ---
 .../run_logs/A_BASELINE_run_29.log                          | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_3.log | 3 ---
 .../run_logs/A_BASELINE_run_30.log                          | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_4.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_5.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_6.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_7.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_8.log | 3 ---
 .../full_90_run_comprehensive/run_logs/A_BASELINE_run_9.log | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_1.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_10.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_11.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_12.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_13.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_14.log   | 3 ---
 .../full_90_run_comprehensive/run_logs/B_CACHE_run_15.log   | 3 ---
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 .../full_90_run_comprehensive/run_logs/C_FULL_run_14.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_15.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_16.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_17.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_18.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/C_FULL_run_19.log    | 3 ---
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 .../full_90_run_comprehensive/run_logs/build_B_CACHE.log    | 3 ---
 .../full_90_run_comprehensive/run_logs/build_C_FULL.log     | 3 ---
 .../physics_experiment/run_logs/A_BASELINE_run_1.log        | 3 ---
 .../physics_experiment/run_logs/A_BASELINE_run_10.log       | 3 ---
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+++ b/.lfsconfig
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+# The files were removed from the tree; the docs/patent ones stay in place under the legal hold.
+# Excluding them here lets older commits check out and `git lfs fetch --all` run without 404s.
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