LithosAnanake/docs/INDEX.md

docs/INDEX.md — every document, and its status

Generated 2026-10-14 by the docs triage (docs/CLAUDE.md, Phase 1), from the tracked tree after the reorganisation. Start at README.md for the map; abandoned ideas and revised claims are in DEAD-AND-REVISED.md; the duplicates deleted 2026-10-14 are recorded in DELETE-CANDIDATES.md. Logs (logs/) and DoE run CSVs are not listed. Bulk data folders, and the formal LaTeX tree (governed by docs/formal/CLAUDE.md), are listed one row per folder.

Status	Meaning	Rows
CURRENT	Accurate; reflects the system as it is	96
WORKING	Living draft or record, still edited	128
HISTORICAL	Accurate for its time; kept as record	90
SUPERSEDED	Replaced -- its header says by what	26
DEAD	An idea or design that was abandoned or never adopted	12
DELETE	Proposed for deletion, awaiting a ruling	0
RECORD	Experiment data and results	50
FORMAL	The press-ready LaTeX tier	19
LEGAL HOLD	Patent-adjacent; not touched without Captain Bob	57

.claude

Path	Title	Status	Notes
.claude/ARTEMIS.md	ARTEMIS.md — Artemis VM Architecture	SUPERSEDED	Frozen 2026-08-15 by ruling (archive as-is); see FABRIC-3.5/3.6.
.claude/CLAUDE.md	CLAUDE.md	CURRENT	Project instructions and status; authoritative.
.claude/CONSOLE.md	CONSOLE.md — Console VM Architecture (DRAFT)	SUPERSEDED	Frozen 2026-08-15; see FABRIC-3.5/3.6.
.claude/HERMES.md	HERMES.md — Hermes VM Architecture	SUPERSEDED	Frozen 2026-08-15; describes a VM that no longer exists. See FABRIC-3.5/3.6.
.claude/README.md	.claude/	CURRENT
.claude/TRIPOD.md	TRIPOD.md — Architectural Constraints for the Tripod VMs	SUPERSEDED	Frozen 2026-08-15; see FABRIC-3.5/3.6.

(root)

Path	Title	Status	Notes
CHANGELOG.md	Changelog	CURRENT
CODE_OF_CONDUCT.md	Contributor Covenant Code of Conduct	CURRENT
CONTRIBUTING.md	Contributing to StarForth	CURRENT
NOTICE.md	NOTICE.md	CURRENT
README.md	LithosAnanke v2.0.1	CURRENT

boards

Path	Title	Status	Notes
boards/BRINGUP.md	Board bring-up checklist	WORKING	Bare-metal bring-up checklist and blockers.
boards/README.md	boards/	CURRENT
boards/milkv/README.md	Milk-V Mars boot media	CURRENT
boards/raspi/README.md	Raspberry Pi 5 native boot media	CURRENT
boards/raspi/config.txt	LithosAnanke native (non-UEFI) boot config for Raspberry Pi 5 (BCM2712).	CURRENT
boards/ser5/README.md	Beelink SER5 boot media	CURRENT
boards/zynq7020/README.md	Xilinx Zynq-7020 boot media	CURRENT

capsules

Path	Title	Status	Notes
capsules/BLOCK_MAP.md	Capsule Block Manifest — Auto-generated	CURRENT
capsules/MANIFEST.md	capsules/MANIFEST.md — Block Ownership Registry (justifications)	CURRENT
capsules/MANIFEST_AUTO.md	Capsule Block Manifest — Auto-generated	CURRENT
capsules/README.md	capsules/	CURRENT
capsules/contrib/README.md	capsules/contrib/	CURRENT
capsules/fonts/README.md	capsules/fonts/	CURRENT

configs

Path	Title	Status	Notes
configs/README.md	configs/	CURRENT

disk

Path	Title	Status	Notes
disk/README.md	disk/	CURRENT

docs

Path	Title	Status	Notes
docs/CLAUDE.md	CLAUDE.md — StarshipOS Documentation Root	CURRENT	Rules for documentation work.
docs/DEAD-AND-REVISED.md	Dead ideas and revised claims	CURRENT	Register of abandoned ideas and revised claims.
docs/DELETE-CANDIDATES.md	docs/DELETE-CANDIDATES.md	CURRENT	Record of the duplicates deleted 2026-10-14.
docs/INDEX.md	docs/INDEX.md — every document, and its status	CURRENT	This index.
docs/README.md	StarForth / LithosAnanke documentation — the map	CURRENT	The map: start here.
docs/SSM_DARPA_Summary_Slide.pptx	SSM_DARPA_Summary_Slide.pptx	CURRENT

docs/book

Path	Title	Status	Notes
docs/book/README.md	docs/book/	CURRENT
docs/book/main.tex	LithosAnanke and StarForth	CURRENT

docs/fabric

Path	Title	Status	Notes
docs/fabric/FABRIC-0.md	FABRIC-0.md — the Stadium	HISTORICAL	Closed design record (the Stadium).
docs/fabric/FABRIC-1.md	FABRIC-1.md — the Stadium, continued	HISTORICAL	Closed design record.
docs/fabric/FABRIC-2.md	FABRIC-2.md — the Stadium, continued again	HISTORICAL	Closed design record.
docs/fabric/FABRIC-3.5.md	FABRIC-3.5.md — the Tripod/kernel reshuffle	HISTORICAL	Closed at v2.1.0: the Tripod/kernel reshuffle, design. Authoritative for what it ruled.
docs/fabric/FABRIC-3.6.md	FABRIC-3.6.md — the Tripod/kernel reshuffle: execution log	HISTORICAL	Closed at v2.1.0: the reshuffle, execution.
docs/fabric/FABRIC-3.7.md	FABRIC-3.7.md — Phase 8 PKI: the elevation entrypoint	DEAD	Closed 2026-10-14: elevation ruled not needed and removed (FABRIC-3 XXXVII).
docs/fabric/FABRIC-3.md	FABRIC-3.md — bare metal boot	WORKING	The living record: bare metal boot and everything since. Authoritative.
docs/fabric/FABRIC-4.md	FABRIC-4.md — forward-looking design notes	WORKING	Ideas caught early, not yet scoped.

docs/formal

Path	Title	Status	Notes
docs/formal/CLAUDE.md	docs/formal/CLAUDE.md — Authoring Conventions for the Formal Documentation Tier	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/README.md	docs/formal/	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/common/	2 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/cookbook/	2 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/dev-guide/	2 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/experiments/	2 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/patent/	1 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/proofs/	2 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/scraps/	1 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/scraps/architecture/	49 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/scraps/archive/	81 files	SUPERSEDED	Flagged obsolete in its own header.
docs/formal/scraps/experiments/	31 files	HISTORICAL	Flagged in its own header.
docs/formal/scraps/hardware/	10 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/scraps/legal/	1 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/scraps/papers/	13 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/scraps/scratch/	23 files	HISTORICAL	Flagged in its own header.
docs/formal/scraps/specifications/	1 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/ssrn/	2 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/user-guide/	2 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/vol1-vm-physics/	9 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/vol2-kernel/	8 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.
docs/formal/vol3-research/	11 files	FORMAL	Press tier; see docs/formal/CLAUDE.md.

docs/patent

Path	Title	Status	Notes
docs/patent/CHANGES_SUMMARY.md	Patent Application Review and Changes	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/JARGON_CHANGES.md	Jargon Removal and Precision Language Changes	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/README_V3.md	StarForth Patent Application Version 3.0	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/USPTO_COVER_LETTER.md	USPTO PROVISIONAL PATENT APPLICATION	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/bibliography/bibliography.tex	bibliography.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/figures/fig1_snake_trajectory.pdf	fig1_snake_trajectory.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/figures/fig2_K_vs_window.pdf	fig2_K_vs_window.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/figures/fig3_FFT_spectrum.pdf	fig3_FFT_spectrum.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/figures/fig4_golden_ratio_penalties.pdf	fig4_golden_ratio_penalties.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/figures/fig5_bimodal_distributions.pdf	fig5_bimodal_distributions.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/figures/fig6_performance_vs_k.pdf	fig6_performance_vs_k.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/figures/fig7_performance_by_regime.pdf	fig7_performance_by_regime.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/final_provisional/cover_letter.txt	cover_letter.txt	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/final_provisional/sb0015a.pdf	sb0015a.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/final_provisional/sb0016.pdf	sb0016.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/final_provisional/ssm_RAJ_v1_patent_application.pdf	ssm_RAJ_v1_patent_application.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/macros/commands.tex	commands.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/main.pdf	main.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/main.tex	main.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sb0015a.pdf	sb0015a.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sb0016.pdf	sb0016.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/00_claims_validation_v3.tex	00_claims_validation_v3.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/00_complete_patent_v3.tex	00_complete_patent_v3.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/01_title.tex	01_title.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/01_title_v2.tex	01_title_v2.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/02_field.tex	02_field.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/02_field_v2.tex	02_field_v2.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/03_background.tex	03_background.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/03_background_v2.tex	03_background_v2.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/04_summary.tex	04_summary.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/04_summary_v2.tex	04_summary_v2.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/05_drawings.tex	05_drawings.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/06_detailed_description.tex	06_detailed_description.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/06_detailed_description_v2.tex	06_detailed_description_v2.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/07_embodiments.tex	07_embodiments.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/08_claims.tex	08_claims.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/08_claims_REAL.tex	08_claims_REAL.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/08_claims_v2.tex	08_claims_v2.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/09_validation.tex	09_validation.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/09_validation_v2.tex	09_validation_v2.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/10_implementation.tex	10_implementation.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/11_abstract.tex	11_abstract.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/11_abstract_REAL.tex	11_abstract_REAL.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/11_abstract_v2.tex	11_abstract_v2.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/11_appendix.tex	11_appendix.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/12_appendix.tex	12_appendix.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/RAJ_v1_01_background.tex	RAJ_v1_01_background.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/RAJ_v1_02_summary.tex	RAJ_v1_02_summary.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/RAJ_v1_03_drawings.tex	RAJ_v1_03_drawings.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/RAJ_v1_04_detailed_description.tex	RAJ_v1_04_detailed_description.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/RAJ_v1_05_claims.tex	RAJ_v1_05_claims.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/RAJ_v1_06_abstract.tex	RAJ_v1_06_abstract.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/sections/architecture_diagram_clean.tex	architecture_diagram_clean.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/ssm_RAJ_v1_patent_application.pdf	ssm_RAJ_v1_patent_application.pdf	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/ssm_RAJ_v1_patent_application.tex	ssm_RAJ_v1_patent_application.tex	LEGAL HOLD	Not touched without Captain Bob.
docs/patent/ssm_provisional_patent.tex	ssm_provisional_patent.tex	LEGAL HOLD	Not touched without Captain Bob.

docs/pptx

Path	Title	Status	Notes
docs/pptx/01-technical-elevator-pitch.pptx	01-technical-elevator-pitch.pptx	CURRENT
docs/pptx/02-nontechnical-elevator-pitch.pptx	02-nontechnical-elevator-pitch.pptx	CURRENT
docs/pptx/03-academic-overview.pptx	03-academic-overview.pptx	CURRENT
docs/pptx/04-phd-deep-dive.pptx	04-phd-deep-dive.pptx	CURRENT
docs/pptx/README.md	docs/pptx/	CURRENT

docs/reference

Path	Title	Status	Notes
docs/reference/DICTIONARY.md	LithosAnanke / StarForth — Word Dictionary Reference	CURRENT
docs/reference/L8_ADAPTIVE_CONFIG_TABLE.md	L8 Jacquard: Adaptive 128-Config Heat-Ranked Selector	CURRENT
docs/reference/M7.1.md	M7.1: Init Capsule Architecture	CURRENT
docs/reference/ONTOLOGY.md	StarForth Ontology, Taxonomy, and Lexicon	CURRENT
docs/reference/ROADMAP.md	LithosAnanke Roadmap	CURRENT	Roadmap and the ratified release-versioning policy.
docs/reference/STARFORTH_PRIMITIVES.md	StarForth Primitive Word Reference	CURRENT
docs/reference/hosted-acceptance-test/README.md	Hosted StarForth — 3-Architecture Acceptance Test	CURRENT
docs/reference/kernel-args/DESIGN.md	Kernel Command-Line Arguments (KernelArgs)	CURRENT
docs/reference/kernel-args/README.md	docs/reference/kernel-args/	CURRENT
docs/reference/word-acl/DESIGN.md	Word-Level ACL System	CURRENT
docs/reference/word-acl/README.md	docs/reference/word-acl/	CURRENT

docs/v4.0.0

Path	Title	Status	Notes
docs/v4.0.0/DECOMPOSITION.md	StarForth v4.0.0 — Primitive Decomposition	CURRENT
docs/v4.0.0/ENGINE.md	StarForth v4.0.0 — The F18 engine in the VM's place	CURRENT
docs/v4.0.0/JUSTIFICATION.md	StarForth v4.0.0 — Justification	CURRENT
docs/v4.0.0/MESH.md	StarForth v4.0.0 — Talking nodes	CURRENT
docs/v4.0.0/NUCLEUS.md	StarForth v4.0.0 — Nucleus, FORTH-79 Capsule and POST	CURRENT
docs/v4.0.0/POST79.md	POST for the FORTH-79 Required Word Set: where it departs from v3	CURRENT
docs/v4.0.0/V3-PARITY.md	StarForth v4.0.0 — Parity with v3 up to the first prompt	CURRENT
docs/v4.0.0/plans/2026-10-06-step6-storage.md	Step 6: Storage Implementation Plan (revised 2026-10-07)	HISTORICAL	An executed step plan.
docs/v4.0.0/plans/2026-10-07-step6b-post.md	Step 6b: POST Is the Kernel's — Implementation Plan	HISTORICAL	An executed step plan.
docs/v4.0.0/plans/2026-10-07-step6c-refusals-and-waits.md	Step 6c: Refusals and Waits — Implementation Plan	HISTORICAL	An executed step plan.
docs/v4.0.0/plans/2026-10-07-step6d-the-wait.md	Step 6d: The Wait — Implementation Plan	HISTORICAL	An executed step plan.
docs/v4.0.0/plans/2026-10-08-step6e-messages-on-the-wire.md	Step 6e: Messages on the Wire — Implementation Plan	HISTORICAL	An executed step plan.

docs/working

Path	Title	Status	Notes
docs/working/README.md	docs/working/ — Living Documentation	WORKING
docs/working/architecture/03-architecture/OVERVIEW.md	StarForth Architecture Overview	WORKING
docs/working/architecture/03-architecture/README.md	Architecture	WORKING
docs/working/architecture/03-architecture/adaptive-systems/adaptive-window-and-decay.md	Adaptive Window Shrinking & Decay Slope Investigation	WORKING
docs/working/architecture/03-architecture/adaptive-systems/multivariate-dynamics.md	StarForth Multivariate Coupled Dynamics Experiment	WORKING
docs/working/architecture/03-architecture/adaptive-systems/window-inference-redesign.md	Window Width Inference Redesign - Statistically Valid Approach	WORKING
docs/working/architecture/03-architecture/heartbeat-system/architecture.md	VM Heartbeat Architecture: Centralized Time-Based Tuning	WORKING
docs/working/architecture/03-architecture/heartbeat-system/critical-insight.md	CRITICAL INSIGHT: Heartbeat Rate is Variable, Not Fixed	WORKING
docs/working/architecture/03-architecture/heartbeat-system/instrumentation-plan.md	Heartbeat Per-Tick Instrumentation Plan	WORKING
docs/working/architecture/03-architecture/heartbeat-system/segfault-analysis.md	Heartbeat Segfault Root Cause Analysis & Repair	WORKING
docs/working/architecture/03-architecture/physics-engine/feedback-loops.md	StarForth Physics Feedback Loops	WORKING	The seven feedback loops.
docs/working/architecture/03-architecture/physics-engine/monitoring-principles.md	StarForth Physics Runtime	WORKING
docs/working/architecture/03-architecture/physics-engine/ssm-equations.md	Mathematical Analysis of the Steady-State Machine	WORKING
docs/working/architecture/03-architecture/physics-engine/ssm-raw-data-analysis.md	Steady-State Machine (SSM): Raw Experimental Data Analysis	WORKING
docs/working/architecture/03-architecture/pipelining/context-window-and-binary-chop.md	Phase 1 Extension: Context Window & Phase 2 Binary Chop Tuning	WORKING
docs/working/architecture/03-architecture/pipelining/design.md	FORTH VM Pipelining & Speculative Execution Design	WORKING
docs/working/architecture/03-architecture/pipelining/phase-1-instrumentation.md	Phase 1: Pipelining Instrumentation	WORKING
docs/working/architecture/03-architecture/pipelining/wired-not-utilized.md	Pipelining Feedback Loop: WIRED BUT NOT UTILIZED (Critical Issue)	WORKING
docs/working/architecture/ARTEMIS-BAM-ACCEPTANCE-20260703.md	Artemis BAM — Phase 1 Acceptance Report	WORKING
docs/working/architecture/ARTEMIS-BLOCK-PHYSICS-DESIGN-20260708.md	Artemis Block Heat Physics — Design Doc	WORKING
docs/working/architecture/ARTEMIS-FREEMAP-CAPSULE-RESERVATION-GAP-20260710.md	Artemis Free-Map Doesn't Reserve Capsule-Claimed Blocks	WORKING
docs/working/architecture/CAPSULE-BLOCK-PERSISTENCE-BOUNDARY-FINDING-20260709.md	Capsule Loader — Missing Persistence Boundary Check	WORKING
docs/working/architecture/CAPSULE-LOADER-DEFINITIONS-ONLY-DESIGN-20260709.md	Capsules Load Definitions Only — Design Doc	WORKING
docs/working/architecture/DOE-LIBRARY-HOWTO-20260819.md	DoE Library HOWTO — capsules/doe.4th	CURRENT	HOWTO for capsules/doe.4th.
docs/working/architecture/K-PUSH-DICTIONARY-SHADOWING-BUG-20260704.md	K-PUSH Dictionary Shadowing Bug — Full Report	WORKING
docs/working/architecture/MAMA_FORTH_SUPERVISOR_ARCHITECTURE.adoc	Mama Forth: Multi-VM Supervisor Architecture	WORKING
docs/working/architecture/PHYSICS_CONE_OF_INFLUENCE_DESIGN.adoc	Physics Engine: Cone of Influence Design	WORKING
docs/working/architecture/PHYSICS_CONTROL_SYSTEM_DESIGN.adoc	Physics Control System: Observables → Scheduling & Memory Management	WORKING
docs/working/architecture/PHYSICS_SIGNAL_MAP.adoc	Physics Signal Inventory	WORKING
docs/working/architecture/README.md	docs/working/architecture/	WORKING
docs/working/architecture/SDK-HOWTO-20260819.md	SDK HOWTO — capsules/sdk.4th	WORKING
docs/working/architecture/TURTLE-GRAPHICS-HOWTO-20260819.md	Turtle Graphics HOWTO — capsules/turtle.4th	WORKING
docs/working/architecture/VM-FLEET-ATTRACTOR-DESIGN-20260705.md	VM Fleet Attractor Experiment — Design Doc	WORKING	Fleet physics; pre-reshuffle (names the Hermes VM) but still the source for the attractor design.
docs/working/architecture/VM-PHYSICS-DYNAMIC-FLEET-DESIGN-20260705.md	Dynamic VM Fleet Physics — Design Doc	WORKING
docs/working/architecture/VM_FORMALIZATION_PLAN.adoc	VM Formalization Roadmap	WORKING
docs/working/architecture/architecture-internals/INIT_SYSTEM.adoc	L4RE_TARGET	WORKING
docs/working/architecture/architecture-internals/MESSAGING.adoc	SFM_THERMO_H	WORKING
docs/working/architecture/build-and-tooling/BUILD_OPTIONS.adoc	defined(x86_64) // defined(_M_X64) // defined(amd64)	WORKING
docs/working/architecture/build-and-tooling/DOCUMENTATION_README.adoc	Generate the AsciiDoc API documentation	WORKING
docs/working/architecture/build-and-tooling/INIT_TOOLS.adoc	1. Work in disk (using StarForth REPL)	WORKING
docs/working/architecture/doxygen/DOXYGEN_QUICK_REFERENCE.adoc	MACRO_NAME value	WORKING
docs/working/architecture/doxygen/DOXYGEN_STYLE_GUIDE.adoc	STACK_SIZE 1024	WORKING
docs/working/architecture/getting-started/DEVELOPER.md	StarForth Developer Guide	WORKING
docs/working/architecture/getting-started/INSTALL.adoc	Build package	WORKING
docs/working/architecture/getting-started/QUICKSTART.adoc	Build the fastest version for your platform	WORKING
docs/working/architecture/getting-started/README.md	Getting Started with StarForth	WORKING
docs/working/architecture/getting-started/quick-start/heartbeat-doe.md	StarForth Heartbeat DoE – Quick Start	WORKING
docs/working/architecture/getting-started/quick-start/optimization-doe.md	Quick Start: Optimization DoE	WORKING
docs/working/architecture/heartbeat_csv_export.md	Heartbeat CSV Export - Real-Time VM Metrics	WORKING
docs/working/archive/COMPUTATIONAL_PHYSICS_FRAMEWORK.md	The Physics of Adaptive Computation	HISTORICAL
docs/working/archive/DOCUMENTATION_AUDIT.md	StarForth Documentation Audit	HISTORICAL
docs/working/archive/GAP_ANALYSIS.md	Gap Analysis: Missing Evolutionary Links	HISTORICAL
docs/working/archive/README.md	docs/working/archive/	HISTORICAL
docs/working/archive/artifacts/kanban-workflow/MANIFEST.adoc	Kanban Workflow Artifacts Manifest	HISTORICAL
docs/working/archive/dead/hal-target-contract/README.md	Hardware Abstraction Layer (HAL) Documentation	DEAD	See the file's own header.
docs/working/archive/dead/hal-target-contract/interfaces.md	HAL Interface Specifications	DEAD	See the file's own header.
docs/working/archive/dead/hal-target-contract/migration-plan.md	HAL Migration Plan	DEAD	See the file's own header.
docs/working/archive/dead/hal-target-contract/overview.md	Hardware Abstraction Layer (HAL) Architecture	DEAD	See the file's own header.
docs/working/archive/dead/hal-target-contract/platform-implementations.md	HAL Platform Implementation Guide	DEAD	See the file's own header.
docs/working/archive/dead/hal-target-contract/starkernel-integration.md	StarKernel HAL Integration Guide	DEAD	See the file's own header.
docs/working/archive/dead/l4re/L4RE_DICTIONARY_ALLOCATION.adoc	STARFORTH_VM_DICT_ALLOC	DEAD	See the file's own header.
docs/working/archive/dead/l4re/L4RE_INTEGRATION.adoc	Subdirectories to build	DEAD	See the file's own header.
docs/working/archive/dead/l4re/L4RE_INTEGRATION_TODO.adoc	Note: Do NOT copy time_posix.c - not needed in L4Re build	DEAD	See the file's own header.
docs/working/archive/dead/l4re/l_4_re_blkio_endpoints.adoc	l_4_re_blkio_endpoints.adoc	DEAD	See the file's own header.
docs/working/archive/dead/metrics-and-knobs.md	StarForth Metrics & Knobs: GAPS ONLY	DEAD	See the file's own header.
docs/working/archive/historical/2026-01-27-system-architecture-draft.md	LithosAnanke System Architecture	HISTORICAL
docs/working/archive/historical/2026-06-03-test-gap-audit.md	StarForth Dictionary Test Coverage — Gap Audit	HISTORICAL
docs/working/archive/historical/2026-06-10-next-session-plan.md	Next Session Plan	HISTORICAL
docs/working/archive/historical/2026-06-30-break-me-report.md	🔥 STARFORTH BREAK-ME DIAGNOSTIC REPORT 🔥	HISTORICAL
docs/working/archive/historical/2026-07-amd64-isr-fix/README.md	APIC Timer ISR Fix — amd64	HISTORICAL
docs/working/archive/historical/2026-07-birthing/PLAN.md	Birthing Plan: Child VMs Born of Hera	HISTORICAL
docs/working/archive/historical/2026-07-birthing/README.md	docs/working/archive/historical/2026-07-birthing/	HISTORICAL
docs/working/archive/historical/2026-07-birthing/STATUS.md	Birthing — Work Status and Context	HISTORICAL
docs/working/archive/historical/2026-07-birthing/acceptance-logs/README.md	docs/working/archive/historical/2026-07-birthing/acceptance-logs/	HISTORICAL
docs/working/archive/historical/2026-07-birthing/acceptance-logs/SUMMARY.md	Birthing — Kernel QEMU Acceptance Test Summary	HISTORICAL
docs/working/archive/historical/2026-08-riscv64-stack-fix/README.md	Kernel Stack Trampoline Fix — riscv64	HISTORICAL
docs/working/archive/historical/2026-10-lithosananke-orientation.md	LithosAnanke — StarForth Kernel Branch	HISTORICAL
docs/working/archive/legacy/OPTIMIZATION_OPPORTUNITIES.md	StarForth Optimization Opportunities	HISTORICAL
docs/working/archive/legacy/README.md	Archived Documentation	HISTORICAL
docs/working/archive/legacy/START_HERE_HEARTBEAT_DOE.md	START HERE – Heartbeat DoE Phase 2	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/BACKLOG_INJECTION_ANALYSIS.md	Backlog Injection Points Analysis	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/EXPERIMENT_QUICK_REFERENCE.txt	Watch CSV grow in real-time	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/IMPLEMENTATION_SUMMARY.md	Physics Engine Comprehensive Validation - Complete Implementation Summary	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/JENKINS_USER_GUIDE.md	Jenkins User Guide	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/KANBAN-TESTING-GUIDE.md	Kanban Workflow Testing Guide	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/KANBAN-WORKFLOW-TEST.md	Kanban Workflow Test Guide (Phase 3)	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/PHASE_1_FINAL_STATUS.md	Phase 1 Final Status & Completion Report	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/PHASE_1_IMPLEMENTATION_COMPLETE.md	Phase 1 Implementation Complete ✅	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/PHASE_1_TESTING_RESULTS.md	Phase 1 Testing Results	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/PHYSICS_EXPERIMENT_README.md	StarForth Physics Engine Validation Experiment	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/RULE_1_GATES_IMPLEMENTATION.md	Rule 1: Governance-First Backlog Injection Gates Implementation	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/SECURITY.md	Security Policy	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/SESSION_SUMMARY.md	Session Summary: Governance Workflow Implementation Complete ✅	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/StarForth_Complete_Presentation.pptx	StarForth_Complete_Presentation.pptx	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/TEST-CAPA-TEMPLATE.md	Test CAPA Issue Template	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/codex_audit_report.md	StarForth Governance – Fresh Audit Report	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/codex_capa_list.md	StarForth Governance – CAPA Register (Fresh Audit)	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/github_backlog_items.md	GitHub Project Backlog Prep	HISTORICAL
docs/working/archive/legacy/phase-1/Reference/physics_experiment/	35 files	HISTORICAL	Grouped: bulk data or a self-governed tree.
docs/working/archive/legacy/phase-1/Reference/toolchain/	2 files	HISTORICAL	Grouped: bulk data or a self-governed tree.
docs/working/archive/operations/README.md	Operations	HISTORICAL
docs/working/archive/operations/backlog-gatekeeper.md	Backlog Gatekeeper Procedures	HISTORICAL
docs/working/archive/operations/jenkins-pipeline-guide.adoc	StarForth Jenkins Pipeline Guide	HISTORICAL
docs/working/archive/operations/qa-intake-workflow.adoc	QA Intake & CAPA Backlog Population Workflow	HISTORICAL
docs/working/archive/operations/refinement/annotations.adoc	StarForth Refinement Code Annotation Guide	HISTORICAL
docs/working/archive/operations/refinement/capa.adoc	StarForth C↔Isabelle Refinement Defect Tracking	HISTORICAL
docs/working/archive/operations/refinement/roadmap.adoc	StarForth C↔Isabelle Refinement Implementation Roadmap	HISTORICAL
docs/working/archive/operations/workflow.md	StarForth CI/CD Workflow	HISTORICAL
docs/working/archive/prog-prove.pdf	prog-prove.pdf	HISTORICAL
docs/working/archive/quality/README.md	Quality Assurance	HISTORICAL
docs/working/archive/quality/audits/codebase-audit-report.md	StarForth Codebase Audit Report	HISTORICAL
docs/working/archive/quality/audits/corrective-actions.md	StarForth Codebase Audit: Corrective Actions Report	HISTORICAL
docs/working/archive/quality/audits/implementation-audit.md	StarForth Adaptive Tuning: Implementation Audit	HISTORICAL
docs/working/archive/quality/audits/section-2-audit.md	SECTION 2 AUDIT REPORT	HISTORICAL
docs/working/archive/quality/audits/section-2-executive-summary.md	SECTION 2 EXECUTIVE SUMMARY	HISTORICAL
docs/working/archive/quality/phase-tracking/phase-2-implementation-checklist.md	Phase 2 Implementation Checklist	HISTORICAL
docs/working/archive/quality/phase-tracking/phase-2-issues-identified.md	Phase 2 Issues: Shrink/Grow, Decay Slope, Fixed-Point Violations	HISTORICAL
docs/working/archive/quality/phase-tracking/phase-2a-session-summary.md	Phase 2a Session Summary: Linear Decay & Freeze Flag Implementation	HISTORICAL
docs/working/archive/quality/regression/detection-framework.md	Optimization Regression Detection Framework	HISTORICAL
docs/working/archive/quality/regression/opp-02-report.md	OPP #2: VARIANCE-BASED WINDOW WIDTH TUNING	HISTORICAL
docs/working/archive/quality/validation/comprehensive-physics-validation.md	Comprehensive Physics Engine Validation Protocol	HISTORICAL
docs/working/archive/quality/validation/phase-1-protocol.md	Phase 1 Governance Validation Protocol	HISTORICAL
docs/working/archive/quality/validation/phase-2-executive-summary.md	Phase 2 Experiment: Executive Summary	HISTORICAL
docs/working/archive/research/README.md	Research	HISTORICAL
docs/working/archive/research/doe-metrics-schema.md	StarForth Design of Experiments (DoE) Metrics Schema	HISTORICAL
docs/working/archive/research/literature-review.md	Literature Review: Physics-Driven VM Optimization	HISTORICAL
docs/working/archive/research/research-outline.md	Research Paper Outline: Physics-Driven VM Optimization	HISTORICAL
docs/working/archive/research/results-for-publication.md	Results for Publication: Physics-Driven VM Optimization	HISTORICAL
docs/working/archive/session-logs/2025-11-20-recap.md	Session Recap: 2025-11-20	HISTORICAL
docs/working/archive/session-logs/2025-11-26-worklog.md	Work Log: November 26, 2025	HISTORICAL
docs/working/archive/session-logs/2026-07-05-worklog.md	Work Log: July 5, 2026	HISTORICAL
docs/working/archive/session-logs/2026-07-24-punch-list.md	Punch List: Gaps from 2026-07-24 Session	HISTORICAL
docs/working/archive/session-logs/README.md	Session Logs	HISTORICAL
docs/working/archive/session-logs/experimental-addendum.md	Window Scaling Experiment — Validation of the James Law of Computational Dynamic	HISTORICAL
docs/working/archive/session-logs/experimental-iteration-usage.md	Experimental Iteration Runner - Usage Guide	HISTORICAL
docs/working/archive/session-logs/serialized-questing-pike.md	StarForth → StarshipOS Hybrid Kernel Transformation Plan	HISTORICAL
docs/working/archive/superseded/2025-12-14-starforth-roadmap.md	StarForth Roadmap: VM → Kernel → OS → FPGA	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/2026-07-08-hermes-message-block-storage-design.md	Hermes Message/Channel Block-Backed Storage — Design Doc	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/2026-07-08-hermes-message-channel-physics-design.md	Hermes Message/Channel Heat Physics — Design Doc	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/2026-08-02-artemis-hermes-compudynamics-plan.md	Artemis (and Hermes) Compudynamics — Implementation Plan	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/2026-08-tripod/03-architecture-README.md	docs/03-architecture/	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/2026-08-tripod/ARTEMIS.md	ARTEMIS.md — Artemis VM Architecture	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/2026-08-tripod/HERMES.md	HERMES.md — Hermes VM Architecture	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/2026-08-tripod/README.md	docs/working/archive/superseded/2026-08-tripod/	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/2026-08-tripod/TRIPOD.md	TRIPOD.md — Architectural Constraints for the Tripod VMs	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/L8_WIRING_PLAN.md	L8 Control Wiring Implementation Plan	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/factorial-doe/guide.md	StarForth Complete 2^6 Factorial Design of Experiments	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/factorial-doe/incompatible-configs.md	Handling Incompatible Configurations in Factorial DoE	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/factorial-doe/index.md	StarForth Complete 2^6 Factorial DoE - Documentation Index	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/factorial-doe/quick-start.md	Quick Start: Complete 2^6 Factorial DoE	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/factorial-doe/workflow.md	Factorial DoE Analysis Workflow	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/feedback-loops-analysis.md	StarForth Feedback Loops & Self-Optimization Analysis	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/heartbeat-doe-corrected-design.md	StarForth Heartbeat DoE – CORRECTED Design (Heartrate Focus)	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/heartbeat-doe-design.md	StarForth Factorial DoE with Heartbeat Integration	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/heartbeat-rate-logging-plan.md	Implementation Plan: Heartbeat Rate Logging	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/loop-5-sketch.md	Loop #5: Context-Aware Window Tuning - Design Sketch	SUPERSEDED	See the file's own header for what replaces it.
docs/working/archive/superseded/steady-state-machine.md	1. Introduction	SUPERSEDED	See the file's own header for what replaces it.
docs/working/experiments/02-experiments/L8_WIRING_CODE_REVIEW_GUIDE.md	L8 Wiring Code Review Guide	WORKING
docs/working/experiments/02-experiments/L8_WIRING_IMPLEMENTATION_SUMMARY.md	L8 Control Wiring Implementation Summary	WORKING
docs/working/experiments/02-experiments/README.md	Experiments	WORKING
docs/working/experiments/02-experiments/heartbeat-doe/execution-guide.md	StarForth Heartbeat DoE Experiment – Execution Guide	WORKING
docs/working/experiments/02-experiments/heartbeat-doe/implementation-summary.md	StarForth Heartbeat DoE – Implementation Summary	WORKING
docs/working/experiments/02-experiments/heartbeat-doe/phase2-corrected.md	StarForth Phase 2 Heartbeat DoE – CORRECTED AND FINALIZED	WORKING
docs/working/experiments/02-experiments/james-law/protocol.md	Critical Window Scaling Experiment	WORKING
docs/working/experiments/02-experiments/physics-optimization/doe-guide.md	StarForth Optimization DoE Guide	WORKING
docs/working/experiments/02-experiments/physics-optimization/execution-guide.md	StarForth Physics Engine - Comprehensive Validation Experiment	WORKING
docs/working/experiments/02-experiments/physics-optimization/hotwords-cache.md	Physics Engine Experiment: Hot-Words Cache Performance Analysis	WORKING
docs/working/experiments/02-experiments/physics-optimization/proposals.md	Physics-Driven Optimization Proposals for StarForth	WORKING
docs/working/experiments/02-experiments/physics-optimization/reproduce.md	Reproducing the Physics Engine Hot-Words Cache Experiment	WORKING
docs/working/experiments/README.md	docs/working/experiments/	WORKING
docs/working/experiments/campaigns/doe_2x7/README.md	2^7 Factorial Design of Experiments (DoE)	RECORD	Campaign data.
docs/working/experiments/campaigns/l8_attractor_map/SESSION_REPORT_2025-12-10.md	L8 Attractor Map: From Crashes to Computational Physics	RECORD	Campaign data.
docs/working/experiments/campaigns/l8_attractor_map/results_20251209_145907/	9 files	RECORD	Campaign data.
docs/working/experiments/campaigns/l8_attractor_map/run_log.txt	run_log.txt	RECORD	Campaign data.
docs/working/experiments/campaigns/l8_validation/EXPERIMENT_SUMMARY.txt	Quick test (10 reps, ~8 min)	RECORD	Campaign data.
docs/working/experiments/campaigns/l8_validation/README.md	L8 Jacquard Mode Selector Validation Experiment	RECORD	Campaign data.
docs/working/experiments/campaigns/l8_validation/l8_validation_20251208_102205/	2 files	RECORD	Campaign data.
docs/working/experiments/campaigns/l8_validation/l8_validation_30reps_20251126_135128/	2 files	RECORD	Campaign data.
docs/working/experiments/campaigns/shape_validation/README.md	Workload Shape Validation Experiment	RECORD	Campaign data.
docs/working/experiments/campaigns/shape_validation/shape_RAJ_run_20251127_093208/	2 files	RECORD	Campaign data.
docs/working/experiments/campaigns/shape_validation/shape_run_20251123_083147/	2 files	RECORD	Campaign data.
docs/working/experiments/campaigns/window_scaling/QUICK_START.md	Window Scaling Experiment - Quick Start Guide	RECORD	Campaign data.
docs/working/experiments/campaigns/window_scaling/README.md	Window Scaling Experiment — James Law Validation	RECORD	Campaign data.
docs/working/hardware/PGO_GUIDE.adoc	Interactive TUI	WORKING
docs/working/hardware/PLATFORM_BUILD_GUIDE.adoc	POSIX Build (Linux/macOS/BSD) - DEFAULT	WORKING
docs/working/hardware/README.md	docs/working/hardware/	HISTORICAL	Flagged in its own header.
docs/working/hardware/performance-profiling/ARM64_OPTIMIZATIONS.adoc	Detect architecture	WORKING
docs/working/hardware/performance-profiling/ASM_OPTIMIZATIONS.adoc	Add to CFLAGS	WORKING
docs/working/hardware/performance-profiling/PROFILER.adoc	Run your typical Forth program with profiling	WORKING
docs/working/hardware/platform-integration/PLATFORM_ABSTRACTION.adoc	POSIX build (default - Linux/macOS/BSD)	WORKING
docs/working/hardware/platform-integration/RASPBERRY_PI_BUILD.adoc	Install dependencies	WORKING
docs/working/legal/README.md	docs/working/legal/ — Patent-Adjacent Material (HOLD)	LEGAL HOLD	Not touched without Captain Bob.
docs/working/papers/ACADEMIC_WORDING_GUIDELINES.md	Academic Wording Guidelines for StarForth	WORKING
docs/working/papers/ANTI_CLAIMS.md	Anti-Claims: What This Work Does NOT Claim	WORKING
docs/working/papers/EXECUTIVE_SUMMARY.md	Executive Summary: StarForth in Plain English	WORKING
docs/working/papers/FINAL_REPORT/appendix_glossary.adoc	appendix_glossary.adoc	WORKING
docs/working/papers/FORMAL_CLAIM_TABLE.md	Formal Claim Table: StarForth Adaptive Runtime	WORKING
docs/working/papers/NEGATIVE_RESULTS.md	Negative Results: Where StarForth Fails	WORKING
docs/working/papers/NULL_HYPOTHESIS.md	Null Hypothesis and Falsification Criteria	WORKING
docs/working/papers/ONTOLOGY_README.md	StarForth Ontology Documentation	WORKING
docs/working/papers/README.md	docs/working/papers/	WORKING
docs/working/papers/REPLICATION_INVITE.md	Invitation to Independent Replication	WORKING
docs/working/papers/REPRODUCIBILITY.md	Reproducibility: One-Command Experiment Reproduction	WORKING
docs/working/papers/SCIENTIFIC_DEFENSE_CHECKLIST.md	Scientific Defense Checklist	WORKING
docs/working/papers/SENSITIVITY_ANALYSIS.md	Sensitivity Analysis: Parameter Robustness	WORKING
docs/working/papers/SSRN_companion/Math_Companion_SSRN.pdf	Math_Companion_SSRN.pdf	WORKING
docs/working/papers/SSRN_companion/Math_Companion_SSRN.tex		WORKING
docs/working/papers/SSRN_companion/figures/fig1_snake_trajectory.pdf	fig1_snake_trajectory.pdf	WORKING
docs/working/papers/SSRN_companion/figures/fig2_K_vs_window.pdf	fig2_K_vs_window.pdf	WORKING
docs/working/papers/SSRN_companion/figures/fig3_FFT_spectrum.pdf	fig3_FFT_spectrum.pdf	WORKING
docs/working/papers/SSRN_companion/figures/fig4_golden_ratio_penalties.pdf	fig4_golden_ratio_penalties.pdf	WORKING
docs/working/papers/SSRN_companion/figures/fig5_bimodal_distributions.pdf	fig5_bimodal_distributions.pdf	WORKING
docs/working/papers/SSRN_companion/figures/fig6_performance_vs_k.pdf	fig6_performance_vs_k.pdf	WORKING
docs/working/papers/SSRN_companion/figures/fig7_performance_by_regime.pdf	fig7_performance_by_regime.pdf	WORKING
docs/working/papers/SYSTEM_NARRATIVE.pdf	SYSTEM_NARRATIVE.pdf	WORKING
docs/working/papers/SYSTEM_NARRATIVE.tex	StarForth System Narrative}\	WORKING
docs/working/papers/ontology.pdf	ontology.pdf	WORKING
docs/working/papers/ontology.tex	StarForth Ontology: Formal Conceptual Framework for\	WORKING
docs/working/papers/proposals/DARPA_SSM_Proposal_James.docx	DARPA_SSM_Proposal_James.docx	WORKING
docs/working/papers/proposals/DARPA_SSM_Proposal_James.pdf	DARPA_SSM_Proposal_James.pdf	WORKING
docs/working/papers/proposals/SSM_DARPA_Complete_Proposal_James_FINAL.docx	SSM_DARPA_Complete_Proposal_James_FINAL.docx	WORKING
docs/working/papers/published/James_ACL_Security_Invariant_TTL_Mitigation.tex	%	WORKING
docs/working/papers/published/James_Steady-State_Convergence_Adaptive_Runtime.pdf	James_Steady-State_Convergence_Adaptive_Runtime.pdf	WORKING
docs/working/scratch/AGENTS.md	Repository Guidelines	WORKING
docs/working/scratch/AI_AGENT_MANDATORY_README.md	AI_AGENT_MANDATORY_README.md	WORKING
docs/working/scratch/COMMUNICATION_GUIDE.adoc	StarshipOS Analogy Cheat Sheet	WORKING
docs/working/scratch/GOVERNANCE_EXPORT_NOTES.adoc	Governance Export Notes (Physics Phase 1)	WORKING
docs/working/scratch/README.md	docs/working/scratch/	WORKING
docs/working/scratch/TASK_LIST.md	StarForth Physics Runtime — TASK_LIST.md	WORKING
docs/working/scratch/assets/README.md	Binary Assets	WORKING
docs/working/scratch/assets/book-FIXED.docx	book-FIXED.docx	WORKING
docs/working/scratch/ci-cd/FMEA_BLOCKING_GATES.adoc	FMEA Blocking Gates Implementation	WORKING
docs/working/scratch/ci-cd/GITHUB_ISSUES_GOVERNANCE_FLOW.adoc	GitHub Issues & Governance Integration	WORKING
docs/working/scratch/ci-cd/GOVERNANCE_INPUT_AUDIT.adoc	Governance Input Audit & Compliance Checklist	WORKING
docs/working/scratch/ci-cd/JENKINS_GOVERNANCE_INTEGRATION.adoc	Jenkins Governance Integration Guide	WORKING
docs/working/scratch/governance/index.adoc	Governance	WORKING
docs/working/scratch/src-index.adoc	StarForth Documentation Index	WORKING
docs/working/scratch/src/INTEGRATION_NOTES.adoc	This blocks EVERYTHING because of empty line:	WORKING
docs/working/scratch/src/development/CONTRIBUTING.adoc	1) Fork and clone	WORKING
docs/working/scratch/src/internal/PHASE_2A_COMPLETION_REPORT.adoc	Phase 2a Completion Report: Freeze Flag & Linear Decay	WORKING
docs/working/scratch/src/internal/PHASE_2_IMPLEMENTATION_SUMMARY.adoc	Phase 2 Implementation Summary & Action Items	WORKING
docs/working/scratch/src/internal/PHASE_2_PHYSICS_DECAY_AND_FREEZE.adoc	Phase 2: Physics Model Extensions — Decay & Freeze Mechanisms	WORKING
docs/working/scratch/src/internal/PHYSICS_HOTWORDS_CACHE_INTEGRATION.adoc	Hot-Words Cache Integration Guide	WORKING
docs/working/scratch/src/internal/PHYSICS_IMPLEMENTATION_OPTIONS.adoc	Physics Engine Implementation Options: Three Paths Forward	WORKING
docs/working/scratch/src/internal/PHYSICS_IMPLEMENTATION_STATUS.adoc	Physics Engine Implementation Status: POSIX vs L4Re Porting Strategy	WORKING
docs/working/scratch/src/internal/PHYSICS_SCHEDULING_PLAN.adoc	Physics-Driven Scheduling Metadata Plan	WORKING
docs/working/scratch/testing-quality/KANBAN-WORKFLOW-VALIDATION.adoc	Kanban Workflow Validation Procedure	WORKING
docs/working/specifications/HOLA_PROTOCOL.adoc	HOLA Shared Memory Protocol (Phase 1)	WORKING
docs/working/specifications/README.md	docs/working/specifications/	WORKING

experiments

Path	Title	Status	Notes
experiments/README.md	experiments/	RECORD	Experiment design, data or result.

experiments/artemis_stress

Path	Title	Status	Notes
experiments/artemis_stress/analysis/	6 files	RECORD	Experiment design, data or result.

experiments/bare_metal

Path	Title	Status	Notes
experiments/bare_metal/README.md	Bare-Metal DoE Experiment	RECORD	Experiment design, data or result.
experiments/bare_metal/analysis/	130 files	RECORD	Experiment design, data or result.

experiments/std79-doe

Path	Title	Status	Notes
experiments/std79-doe/README.md	std79 DoE — 3(architecture) × 9(identity) × 3(replicate) randomized full-factori	RECORD	Experiment design, data or result.
experiments/std79-doe/analysis-20260912/	2 files	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/README.md	std79-doe LaTeX report: the fleet conservation invariant K	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/actual_window_size_dark.pdf	actual_window_size_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/actual_window_size_light.pdf	actual_window_size_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/apic_delta_dark.pdf	apic_delta_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/apic_delta_light.pdf	apic_delta_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/artemis_heat_dark.pdf	artemis_heat_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/artemis_heat_light.pdf	artemis_heat_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/avg_word_heat_dark.pdf	avg_word_heat_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/avg_word_heat_light.pdf	avg_word_heat_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/fleet_k_dark.pdf	fleet_k_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/fleet_k_light.pdf	fleet_k_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/hera_heat_dark.pdf	hera_heat_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/hera_heat_light.pdf	hera_heat_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/hermes_heat_dark.pdf	hermes_heat_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/hermes_heat_light.pdf	hermes_heat_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/hot_word_count_dark.pdf	hot_word_count_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/hot_word_count_light.pdf	hot_word_count_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/jitter_ns_dark.pdf	jitter_ns_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/jitter_ns_light.pdf	jitter_ns_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/time_trust_dark.pdf	time_trust_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/time_trust_light.pdf	time_trust_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/variance_dark.pdf	variance_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/variance_light.pdf	variance_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/vm_call_depth_max_dark.pdf	vm_call_depth_max_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/vm_call_depth_max_light.pdf	vm_call_depth_max_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/window_width_dark.pdf	window_width_dark.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/figures/window_width_light.pdf	window_width_light.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/std79_doe_report.pdf	std79_doe_report.pdf	RECORD	Experiment design, data or result.
experiments/std79-doe/report-20260912/report/std79_doe_report.tex	%	RECORD	Experiment design, data or result.

experiments/std79-exerciser

Path	Title	Status	Notes
experiments/std79-exerciser/README.md	FORTH-79 Standard-Dictionary Cross-ISA Exerciser	RECORD	Experiment design, data or result.
experiments/std79-exerciser/results-20260910/	27 files	RECORD	Experiment design, data or result.

img

Path	Title	Status	Notes
img/README.md	img/	CURRENT

kernel

Path	Title	Status	Notes
kernel/include/starkernel/README.md	include/starkernel/	CURRENT
kernel/include/starkernel/freestanding/README.md	include/starkernel/freestanding/	CURRENT
kernel/include/starkernel/freestanding/sys/README.md	include/starkernel/freestanding/sys/	CURRENT
kernel/include/starkernel/hal/README.md	include/starkernel/hal/	CURRENT
kernel/include/starkernel/vm/README.md	include/starkernel/vm/	CURRENT
kernel/include/starkernel/vm/bootstrap/README.md	include/starkernel/vm/bootstrap/	CURRENT
kernel/linker/README.md	linker/	CURRENT
kernel/src/README.md	src/starkernel/	CURRENT
kernel/src/arch/aarch64/README.md	src/starkernel/arch/aarch64/	CURRENT
kernel/src/arch/amd64/README.md	src/starkernel/arch/amd64/	CURRENT
kernel/src/arch/riscv64/README.md	src/starkernel/arch/riscv64/	CURRENT
kernel/src/boot/README.md	src/starkernel/boot/	CURRENT
kernel/src/capsule/README.md	src/starkernel/capsule/	CURRENT
kernel/src/hal/README.md	src/starkernel/hal/	CURRENT
kernel/src/hash/README.md	src/starkernel/hash/	CURRENT
kernel/src/math/README.md	src/starkernel/math/	CURRENT
kernel/src/memory/README.md	src/starkernel/memory/	CURRENT
kernel/src/pci/README.md	src/starkernel/pci/	CURRENT
kernel/src/virtio/README.md	src/starkernel/virtio/	CURRENT
kernel/src/vm/README.md	src/starkernel/vm/	CURRENT
kernel/src/vm/bootstrap/README.md	src/starkernel/vm/bootstrap/	CURRENT
kernel/src/vm/host/README.md	src/starkernel/vm/host/	CURRENT

lfs

Path	Title	Status	Notes
lfs/README.md	lfs/	CURRENT

mk

Path	Title	Status	Notes
mk/README.md	mk/	CURRENT

proof

Path	Title	Status	Notes
proof/COVERAGE.md	Isabelle/HOL Proof Suite — Coverage & Purpose	CURRENT
proof/FINDINGS.md	Isabelle/HOL Word-Source Sweep — Aggregated Architectural Findings	CURRENT
proof/README.md	proof/	CURRENT

scripts

Path	Title	Status	Notes
scripts/README.md	scripts/	CURRENT
scripts/SCRIPT_REPAIR_LOG.md	Ablation Study Script Repair Log	CURRENT

tools

Path	Title	Status	Notes
tools/README.md	tools/	CURRENT
tools/capsule-reserved.txt	capsule-reserved.txt — human-authored, git-tracked block ranges NOT	CURRENT
tools/kconfig/README.md	tools/kconfig — vendored Linux kernel Kconfig tooling	CURRENT

v3

Path	Title	Status	Notes
v3/include/README.md	include/	CURRENT
v3/src/README.md	src/	CURRENT
v3/src/platform/README.md	src/platform/	CURRENT
v3/src/platform/l4re/README.md	src/platform/l4re/	HISTORICAL	Flagged in its own header.
v3/src/platform/linux/README.md	src/platform/linux/	CURRENT
v3/src/test_runner/README.md	src/test_runner/	CURRENT
v3/src/test_runner/include/README.md	src/test_runner/include/	CURRENT
v3/src/test_runner/modules/README.md	src/test_runner/modules/	CURRENT
v3/src/word_source/README.md	src/word_source/	CURRENT
v3/src/word_source/include/README.md	src/word_source/include/	CURRENT

v4

Path	Title	Status	Notes
v4/README.md	v4/	CURRENT